CDS

Accession Number TCMCG057C46846
gbkey CDS
Protein Id XP_018451626.1
Location join(29030609..29030725,29030842..29031003,29031097..29031184,29031288..29031518,29031607..29031774,29031937..29032127,29032227..29032310,29032394..29032513,29032600..29032786,29032870..29033030,29033365..29033436,29033737..29033813,29033907..29034101,29034194..29034266,29034384..29034470,29034596..29034733,29034821..29035023,29035107..29035269,29035418..29035549)
Gene LOC108822923
GeneID 108822923
Organism Raphanus sativus

Protein

Length 882aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018596124.1
Definition PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category O
Description Zinc finger, C3HC4 type (RING finger)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K10696        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006513        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006955        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009965        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010016        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010162        [VIEW IN EMBL-EBI]
GO:0010228        [VIEW IN EMBL-EBI]
GO:0010390        [VIEW IN EMBL-EBI]
GO:0010431        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016574        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0021700        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022611        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032504        [VIEW IN EMBL-EBI]
GO:0033523        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042803        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045087        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048366        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048609        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071695        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGAACCAGGAATCGGACGAGCCGATGCAGAAGAAGCCTCATCTTCTGGACTCCGTTTCTCCCACTGCCGCCATGTCCCTTAGTTCTTCACCTTCTCGCCCCGTCGCCAAAAGTGTTGATGCCACGGTTCTACAGTTAGAGAATCAGAAACTTGTACAGCAATTAGACCTGCAGAAGAAACGTATTTACGATGTTGAGACTAAGATCAATGAGTTGCATCTCAACCAAACCTTTTATGATGACCAACTTATCTCTGTTAACCGCCTTTGGAACCAGTTGGTAGATGATCTGGTCTTGCTTGGAGTTCGTGCTGGAGCTAATCATGAGGCTCTCAAATACTTGGACATTGCAGATAAAAAGCGAGGTTCAGTTCCTCCATGCGCTGCTGAAGAAATGTTTCTATGTAGACTTCTTCAAGTAGATTCCATAGGTACTAGTAATTGTGATGAGGTAGTAAGAAAGGTTGAAGAAGGTCTTGCTCTGCGTCATTCCTCTACGGTGGAGTTGATGGGTGTCTTTGAAAACAACATTGCTTCTCAGAGGGCCAAAGCTGAAAGCATATCACAAAATTTACTTGCTGTGAAATCTGCAGAAGATGCCACTGTTCAGTTGTCCAGCATTAACGATTTAATGAAAGAGGAGGCCAAAAACTTGCGTGAGATGATTGATGTTTTAAATGCGAGGCACAAAGAACATACTGAGCAGATTCAGGCGTATGTAAGCAGCCATTCAACAGATCAGTCCGAGCTTAAACACCTCAAAGGTGAACTGGAAGAGATCAAGGCTGAGCTTGAAGAAAATAGAAGAAAATTGATAAACCTGAAAATGCAGAAGGATGCTGCATGTGAAGGTCATGTAACATCACCAGCGGTAGCTAATGGAAGCGTCTCTCCTGAGAAGCCTGTAGATAAAACGAAGTTGCGTGAATTGAAGGACTCAATTGATGAAATAAAGGCAGTGGCAGAAGGTCGTCTGTCTGAGCTCCAAGCTGCACAAGAGTATAATCTTTCCTTGTCAAGACAGTGTCAAGATATTGAGAATGAACTAAAGGATGATCAGTATATATACTCGTCTAGACTGTATAGCTTGATCAAAGATCAACTTAATCACTGGAATTTGGAAGTGGATCGGTACAAAGTTTTGACCGAGGCCGCTCAGGCTGAAAGGTCCTTTGTAATGAGACGGGAGAAGGACCTAAATCTAAGGGAAGAATCCCTGGAGGCAGCTAAACAGAAGATAACTACTGTTGGTTCTCGAATTGAAGTGCTGGAACAGAAGCTGCAAAGTTGTATAGTTGAAAAGAATGGACTAGAGCTTGAAACAGAAGAAGCTATTCAAGACTCTGAGCGGCAAGATATTAAAAGGGAGTTTATTACAATGGCATCAACGTTGTCTAAAGAGATGGAAATGATGGAAGCGCAGTTGAAACGATGGAAGAACACCGCACATGATGCTCTTGACCTGCGTCAACAAGCTCAGTCGCTGAGGGCTTCGTTAAGTAATAAGGCAGACGAACAGAAGGGTTTAGAGGATAAATGTGCTGAACAGATGGCAGAAATTAAATCTCTCAAAGCTCTAATTGAAAAACTTCTGAAAGAGAAATTAGAGTTGCAAAATCTAGCGAGCATCTATACTCGTGAGAGTAATGATGAAAGAGGATTGGTAGAAATCAAGGAATCACAACGGAAAGCACATACTCAGGCTGAGGAGCTGAAAAACGTTTTGGACGAACACTTTCTTGAGTTGAGAGTGAAAGCAGCTAATGAAACTGAAACTGCTTGCCAAGAACGGCTTGCTACCGCAAAGGCTGAAATTGCTGAATTGAGGACTCAGTTAGATACTTCTGAGAGGGAGGTTTTGGAACTTAAGGAAGGTATCAAAGTTAAAGAGCAGGAGGCAGAGGCTTTGATTGCTGAAATGGAGACTGTCGGTCAAGCCTATGAAGACATGCAAACACAGAACCAACATTTGTTGCAGCAGGTGGCTGAGCGGGATGATTATAATATCAAGCTTGTTTCCGAGAGTGTCAAGACAAAGCATGCTTACAACACTCACTTATCTGAGAAGCAAGTAATGGAAAAGCAGCTCCAAAATGTTAATGCATCAGTAGAGGCTCTAAAAGCAAGGATTGCACATAGTGAGGAACAGATGAAAGGCTGTTTCTCTGAAGCTTATAAACTGATTCAAGAAGATCGTCACCTCGTTCTCAGTCTCGAAACCGCCAAGTGGGAATTAGCTGACGCTGAAAAGGAGTTCAGGTGGATCAAGTCAGCTGTTTCTTCATCCGAGAAGGAATACGAACAGATCAGCAGGAGGACAAACGAAATCAAACTGGAACTGGATGATGAAAGGAGTGAGAAGAAAAAGCTTGAGGAAGAGCTGATGGAGTTGAACAAGGAGCTTGAAGAGTTGGGTTCTGAGAGTGTAGAAGCTGCAACACTGAGACTCCAGGAAGAAGTTAAGAATTGCAAAAACATCCTCAAGTGTGGCGTTTGTTTTGATCGGCCTAAAGAGGTGGTAATTATGAAATGTTTTCATCTCTTCTGCAAGCAATGCATCCAACGAAGCTTAGAGATCCGACACCGGAAATGTCCAGGCTGTGGCACTGCCTTTGGCCAGAGTGACGTCAGGGTTGTCAAAATGTAA
Protein:  
MENQESDEPMQKKPHLLDSVSPTAAMSLSSSPSRPVAKSVDATVLQLENQKLVQQLDLQKKRIYDVETKINELHLNQTFYDDQLISVNRLWNQLVDDLVLLGVRAGANHEALKYLDIADKKRGSVPPCAAEEMFLCRLLQVDSIGTSNCDEVVRKVEEGLALRHSSTVELMGVFENNIASQRAKAESISQNLLAVKSAEDATVQLSSINDLMKEEAKNLREMIDVLNARHKEHTEQIQAYVSSHSTDQSELKHLKGELEEIKAELEENRRKLINLKMQKDAACEGHVTSPAVANGSVSPEKPVDKTKLRELKDSIDEIKAVAEGRLSELQAAQEYNLSLSRQCQDIENELKDDQYIYSSRLYSLIKDQLNHWNLEVDRYKVLTEAAQAERSFVMRREKDLNLREESLEAAKQKITTVGSRIEVLEQKLQSCIVEKNGLELETEEAIQDSERQDIKREFITMASTLSKEMEMMEAQLKRWKNTAHDALDLRQQAQSLRASLSNKADEQKGLEDKCAEQMAEIKSLKALIEKLLKEKLELQNLASIYTRESNDERGLVEIKESQRKAHTQAEELKNVLDEHFLELRVKAANETETACQERLATAKAEIAELRTQLDTSEREVLELKEGIKVKEQEAEALIAEMETVGQAYEDMQTQNQHLLQQVAERDDYNIKLVSESVKTKHAYNTHLSEKQVMEKQLQNVNASVEALKARIAHSEEQMKGCFSEAYKLIQEDRHLVLSLETAKWELADAEKEFRWIKSAVSSSEKEYEQISRRTNEIKLELDDERSEKKKLEEELMELNKELEELGSESVEAATLRLQEEVKNCKNILKCGVCFDRPKEVVIMKCFHLFCKQCIQRSLEIRHRKCPGCGTAFGQSDVRVVKM